Source: UNIVERSITY OF CENTRAL FLORIDA submitted to
CHLOROPLAST GENETIC ENGINEERING
Sponsoring Institution
Agricultural Research Service/USDA
Project Status
TERMINATED
Funding Source
Reporting Frequency
Annual
Accession No.
0405373
Grant No.
(N/A)
Project No.
3611-21000-021-01S
Proposal No.
(N/A)
Multistate No.
(N/A)
Program Code
(N/A)
Project Start Date
Mar 4, 2002
Project End Date
Jan 14, 2007
Grant Year
(N/A)
Project Director
PORTIS JR A R
Recipient Organization
UNIVERSITY OF CENTRAL FLORIDA
12722 RESEARCH PARKWAY
ORLANDO,FL 32826
Performing Department
MOLECULAR BIOLOGY & MICROBIOLOGY
Non Technical Summary
(N/A)
Animal Health Component
(N/A)
Research Effort Categories
Basic
100%
Applied
0%
Developmental
0%
Classification

Knowledge Area (KA)Subject of Investigation (SOI)Field of Science (FOS)Percent
20124101040100%
Goals / Objectives
Develop and demonstrate procedures for stable transformation of chloroplast genome of plants without creating serious disruptions to photoysnthesis and to normal chloroplast metabolism. Determine inheritance patterns of genes selected for insertion and what limitations, if any, are imposed by plastid transformation rather than nuclear transformation. Utilize new procedures to develop plants capable of synthesizing high-value products, such as pharmaceuticals, or capable of enhanced productivity.
Project Methods
Genetic engineering of plants has tremendous potential to create crops with new metabolic capabilities, like the ability to accumulate pharamecuticals or other high-value specialty materials. In addition to metabolic engineering itself, however, there are some obstacles to be overcome before these technologies can be commercialized. One is the potential for spread of transgenes from the engineered plants to conventional fields of the same crop, largely by dispersal of pollen. An attractive approach to the problem of gene dispersal is to genetically engineer the chloroplast male gametophyte (pollen).

Progress 03/04/02 to 01/14/07

Outputs
Progress Report Objectives (from AD-416) Develop and demonstrate procedures for stable transformation of chloroplast genome of plants without creating serious disruptions to photoysnthesis and to normal chloroplast metabolism. Determine inheritance patterns of genes selected for insertion and what limitations, if any, are imposed by plastid transformation rather than nuclear transformation. Utilize new procedures to develop plants capable of synthesizing high-value products, such as pharmaceuticals, or capable of enhanced productivity. Approach (from AD-416) Genetic engineering of plants has tremendous potential to create crops with new metabolic capabilities, like the ability to accumulate pharamecuticals or other high-value specialty materials. In addition to metabolic engineering itself, however, there are some obstacles to be overcome before these technologies can be commercialized. One is the potential for spread of transgenes from the engineered plants to conventional fields of the same crop, largely by dispersal of pollen. An attractive approach to the problem of gene dispersal is to genetically engineer the chloroplast male gametophyte (pollen). Significant Activities that Support Special Target Populations This report serves to document research conducted under a Specific Cooperative Agreement between ARS and the University of Central Florida. Additional details of the research can be found in the report for the parent project 3611-21000-021-00D, Chloroplast Genetic Engineering. The major accomplishments of the research follow. Several human therapeutic proteins were expressed in transgenic plants, including vaccines and pharmaceuticals. High-level expression of these proteins in the chloroplast has potential to significantly lower their production cost. The carrot chloroplast genome was successfully transformed to confer high levels of salt tolerance and high levels of foreign gene expression were achieved in the edible part (roots). The accomplishment facilitates using chloroplast transformation for oral delivery of vaccines and other therapeutic proteins. The cotton chloroplast genome was successfully modified using novel chloroplast vector designs and demonstrated maternal inheritance patterns of the foreign genes. Chloroplast transformation of cotton had not been reported previously. The feasibility of multi-gene engineering for expression of foreign genes via the chloroplast genome was demonstrated. This work advances the prospect of engineering of complete foreign metabolic pathways. It was demonstrated that cytoplasmic male sterility could be engineered into plants via the chloroplast genome. This work offers a new tool for transgene containment for both nuclear and organelle genomes and provides an expedient mechanism for F1 hybrid seed production. The chloroplast genomes of several agriculturally important crops, namely, soybean, grape, cotton, potato, tomato, orange, coffee and carrot, were completely sequenced. The lack of complete chloroplast genome sequences has been one of the major limitations to extending chloroplast genetic engineering technology with its multiple benefits over nuclear genome engineering to useful crops. The availability of these complete chloroplast genome sequences should facilitate the development of technologies for improved transformation efficiency and foreign protein expression. It was demonstrated that the gene encoding the small subunit of Rubisco, which is normally located in the nucleus, could be expressed from the chloroplast genome to achieve near normal rate of photosynthesis and that nuclear transformation with a foreign Rubisco small subunit gene combined with RNAi (RNA interference) directed against the 3�-untranslated region of the tobacco small subunit gene family could be combined to allow a high level of foreign small subunit gene expression with greatly reduced native small subunit expression. The research opens a potential avenue for the facile evaluation of foreign Rubisco genes in plants and advances the prospect that a completely foreign Rubisco, consisting of both large and small subunits, with properties that can take advantage of the increasing atmospheric carbon dioxide level can be successfully expressed in plants. Research progress was monitored via emails and semiannual reports.

Impacts
(N/A)

Publications


    Progress 10/01/05 to 09/30/06

    Outputs
    Progress Report 1. What major problem or issue is being resolved and how are you resolving it (summarize project aims and objectives)? How serious is the problem? Why does it matter? This project is aligned with NP 302, Plant Biological and Molecular Processes. a) Transgene containment Genetic engineering of plants has tremendous potential to create crops with new metabolic capabilities, such as the ability to accumulate pharmaceuticals or other high value specialty materials. In addition to the metabolic engineering itself, however, there are some obstacles to be overcome before these technologies can be commercialized. One is the potential for spread of transgenes from the engineered plants to conventional fields of the same crops, largely by dispersal of pollen. An attractive approach to the problem of gene dispersal is to genetically engineer the chloroplast genome of crop plants, which is maternally inherited and is not transmitted through pollen. Potential for gene flow also exists via transgenic seeds. Both of these could be avoided by harvesting foreign proteins from vegetative organs (leaves) before the onset of flowers or by engineering plants that are biennial, in which vegetative organs (like carrots containing therapeutic proteins) are harvested the first year when they do not flower. As a further safeguard, engineering cytoplasmic male sterility has potential to also provide transgene containment. Because gene flow via pollen and seeds is such a potentially serious problem, a number of government and private agencies are in search of solutions that will allow transgenic corps to be developed for commercial purposes, especially when the production of pharmaceutical proteins is being considered. b) Engineer plants to survive salt stress via the chloroplast genome Salt stress is a major abiotic stress in plant agriculture. The problem of soil salinity has been compounded by irrigation and excessive use of fertilizers. About 20% of the world's irrigated lands are affected by salinity. Currently, high salinity limits crop production in 30% of the irrigated land in the United States and 20 million hectares globally. Carrot is classified as a salt sensitive plant and there is 7% growth reduction for every 10 mM increment in salinity above 20 mM salt. Therefore carrot is an ideal candidate for genetic manipulation for increased salt tolerance. c) Engineering the cotton chloroplast genome Cotton (Gossypium hirsutum L.) is an excellent natural source of textile fiber in the world and one of the world's most important commercial crops. The U.S. accounts for over 40% of total world fiber production ($6.1 billions annual sales) and is one of leading exporter in global trade of raw cotton. Products like cotton lint and cottonseed are among the top 20 major agricultural products of the United States by value as reported by the FAO in 2003 [www.fao.org/]. The annual business revenue stimulated by cotton in the U.S. economy is about $120 billion each year, making cotton America's number one high value crop. However, cotton is particularly challenging to manipulate in-vitro due to the difficulties encountered in plant regeneration through somatic embryogenesis. In 2002/03 insect and herbicide resistant transgenic cotton was planted on 13% of the total area of world after soybean (63%) and corn (19%) and on 77% of the total area in the USA, modified via the nuclear genome, compared to 81% of GM soybean and 40% GM corn [http://www.ers.usda.gov]. So far, nuclear transgenic cotton is practiced only in restricted areas of the world. For instance, Upland cotton, Gossypium hirsutum, has the potential to hybridize with Hawaiian cotton, G. tomentosum, and feral populations of G. hirsutum in the Florida Keys, and of G. hirsutum / G. barbadense on the U.S. Virgin Islands and Puerto Rico. For these reasons, restrictions on field plot experimental use permits and commercial planting of Bt-cotton has been instituted in these areas. Similarly, GM cotton is now planted only in regions of the world where there are no wild relatives, in order to avoid potential outcross with related weeds. Dispersal of pollen from transgenic cotton plants to surrounding non- transgenic plants has been reported. Umbeck et al. [J. Econ. Entomol. 84: 1943-1950] investigated pollen dispersal from transgenic cotton embedded in a field of conventional cotton in the United States and observed up to 5.7% out-crossing rates inspite of buffer rows. Transgene escape could be avoided via chloroplast genetic engineering because of maternal inheritance of transgenes in cotton. Another concern about GM crops expressing Bt toxins is that suboptimal production of toxins might result in an increased risk of pests developing Bt resistance. Nuclear engineered Bt cotton due to low expression of transgenes is not fully protected from the insect-pest attack and it needs several sprays of pesticides on crop fields to minimize the yield loss. d) Low-cost production of vaccines and biopharmaceuticals Another major problem is the high cost of biopharmaceuticals. Globally, about 170 million people are infected with hepatitis C virus, with 3-4 million new infections each year (WHO fact sheet 164, October 2000). WHO Department of Communicable Disease Surveillance and Response reports that more than one third of world population is infected with Hepatitis B. In Asia, the prevalence of chronic hepatitis B and C is very high (about 110 million infected by HCV and 150 million infected by HBV). A large majority of Hepatitis C infected patients have severe liver cirrhosis and currently there is no vaccine available for this disease. The annual requirement of Insulin like Growth Factor I, per cirrhotic patient is 600 mg (1.5-2 mg per day) and the cost of IGF-1 per mg is $30,000. Current annual cost of interferon therapy for viral hepatitis is $26,000 per year (Cowley & Geoffrey, Newsweek, April 22, 2002). Therefore, agricultural scale production of therapeutic proteins and vaccines (especially for agents of bioterrrorism) is necessary to meet such large demand at a reasonable cost. However, this should be achieved without contaminating our food supply and harming the environment or other life forms. Agricultural production of therapeutic proteins should dramatically lower cost for consumers. There is an urgent need for oral delivery of therapeutic proteins and vaccine antigens to dramatically reduce their production, purification, storage and transportation costs and minimize complications associated with intravenous delivery. Oral delivery of therapeutic proteins via plant cells (like carrots) should lower the production cost by 70-90% compared to intravenous delivery. 2. List by year the currently approved milestones (indicators of research progress) 1. Engineer the chloroplast genome of economically important crops, including Cotton and Carrot. (FY2002-04) 2. Express vaccine antigens and other human therapeutic proteins via the tobacco chloroplast genome for purification. (FY2003-07) 3. Express vaccine antigens and other human therapeutic proteins via the carrot chloroplast genome for oral delivery. (FY2006-07) 4. Determine the DNA sequence of the chloroplast genome of economically important crops. (FY2006-07) 5. Modify the tobacco chloroplast genome to introduce a glycosylation pathway. (FY2007-07) 6. Develop new methods to improve transgene containment. (FY2004-07) 4a List the single most significant research accomplishment during FY 2006. The accomplishment aligns with the ARS National Program Action Plan-Plant Biological and Molecular Processes and contributes to Component 3 (Plant Biotechnology Risk Assessment), Problem 3A: Improving and Assessing Genetic Engineering Technology. The sequences of the complete chloroplast genomes of cotton, grape, potato and tomato were obtained by researchers at the University of Central Florida. This sequence information is essential for the genetic engineering of these economically important crops. 4d Progress report. This report serves to document research conducted under a Specific Cooperative Agreement between ARS and the University of Central Florida. Additional details of the research can be found in the report for the parent research project #3611-21000-017-00D, Chloroplast Genetic Engineering. The research is developing chloroplast genetic engineering technology, with its unique advantages, to create crops with new metabolic capabilities, such as the capability to produce pharmaceuticals and other high-value specialty materials. This year the sequences of the complete chloroplast genomes of cotton, grape, potato and tomato were obtained. 6. What science and/or technologies have been transferred and to whom? When is the science and/or technology likely to become available to the end- user (industry, farmer, other scientists)? What are the constraints, if known, to the adoption and durability of the technology products? Because of unique advantages of the chloroplast genetic engineering technology, a new biotech company has been formed for commercial development of chloroplast transformation technology. Despite recent failures of several plant made pharmaceutical companies and down turn in economy, this company has attracted multi-million dollar investment. The company is now conducting field trials of transgenic plants for large- scale production and purification of therapeutic proteins is in progress. Establishment of this company has already created high tech jobs in Florida, South Carolina and Missouri. In addition, this company is in the process of licensing dominant patents awarded to researchers to several major biotechnology companies. Therefore several crop plants will be genetically modified using chloroplast technology, in an environmentally friendly manner to confer much needed agronomic traits or to clean up the environment (phytoremediation of toxic metals) or produce high value biomaterials (such as biodegradable polymers). Major constrains are the cost of clinical trials and public acceptance of genetically modified crops, especially in Europe. 7. List your most important publications in the popular press and presentations to organizations and articles written about your work. (NOTE: List your peer reviewed publications below). Daniell, H., Lee, S.B., Grevich, J., Saski, C., Quesada-Vargas, T., Guda, C., Tomkins, J., Jansen, R.K. 2006. Complete chloroplast genome sequences of Solanum bulboscastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes. Theoretical and Applied Genetics. 112:1503-1518. Jansen, R.K., Kaittanis, C., Saski, C., Lee, S-B., Tomkins, J., Alverson, A.J., Daniell, H. 2006. Phylogenetic analyses of Vitis (Vitaceae) based on complete chloroplast genome sequences: effects of taxon sampling and phylogenetic methods on resolving relationships among rosids. BMC Evolutionary Biology. 6:32-46. Lee S-B., Kaittanis C., Hostetler J., Town C., Jansen R.K., Daniell H. 2006. The complete chloroplast genome sequence of Gossypium hirsutum: organization and phylogenetic relationships to other angiosperms. BMC Genomics. 7: 61-77.

    Impacts
    (N/A)

    Publications


      Progress 10/01/04 to 09/30/05

      Outputs
      1. What major problem or issue is being resolved and how are you resolving it (summarize project aims and objectives)? How serious is the problem? What does it matter? a) Transgene containment Genetic engineering of plants has tremendous potential to create crops with new metabolic capabilities, such as the ability to accumulate pharmaceuticals or other high value specialty materials. In addition to the metabolic engineering itself, however, there are some obstacles to be overcome before these technologies can be commercialized. One is the potential for spread of transgenes from the engineered plants to conventional fields of the same crops, largely by dispersal of pollen. An attractive approach to the problem of gene dispersal is to genetically engineer the chloroplast genome of crop plants, which is maternally inherited and is not transmitted through pollen. Potential for gene flow also exists via transgenic seeds. Both of these could be avoided by harvesting foreign proteins from vegetative organs (leaves) before the onset of flowers or by engineering plants that are biennial, in which vegetative organs (like carrots containing therapeutic proteins) are harvested the first year when they do not flower. As a further safeguard, engineering cytoplasmic male sterility has potential to also provide transgene containment. Because gene flow via pollen and seeds is such a potentially serious problem, a number of government and private agencies are in search of solutions that will allow transgenic corps to be developed for commercial purposes, especially when the production of pharmaceutical proteins is being considered. b) Engineer plants to survive salt stress via the chloroplast genome Salt stress is a major abiotic stress in plant agriculture. The problem of soil salinity has been compounded by irrigation and excessive use of fertilizers. About 20% of the worlds irrigated lands are affected by salinity. Currently, high salinity limits crop production in 30% of the irrigated land in the United States and 20 million hectares globally. Carrot is classified as a salt sensitive plant and there is 7% growth reduction for every 10 mM increment in salinity above 20 mM salt. Therefore carrot is an ideal candidate for genetic manipulation for increased salt tolerance. c) Engineering the cotton chloroplast genome Cotton (Gossypium hirsutum L.) is an excellent natural source of textile fiber in the world and one of the worlds most important commercial crops. The U.S. accounts for over 40% of total world fiber production ($ 6.1 billions annual sales) and is one of leading exporter in global trade of raw cotton. Products like cotton lint and cottonseed are among the top 20 major agricultural products of the United States by value as reported by the FAO in 2003 [www.fao.org/]. The annual business revenue stimulated by cotton in the U.S. economy is about $120 billion each year, making cotton Americas number one high value crop. However, cotton is particularly challenging to manipulate in-vitro due to the difficulties encountered in plant regeneration through somatic embryogenesis. In 2002/03 insect and herbicide resistant transgenic cotton was planted on 13% of the total area of world after soybean (63%) and corn (19%) and on 77% of the total area in the USA, modified via the nuclear genome, compared to 81% of GM soybean and 40% GM corn [http://www.ers.usda.gov]. So far, nuclear transgenic cotton is practiced only in restricted areas of the world. For instance, Upland cotton, Gossypium hirsutum, has the potential to hybridize with Hawaiian cotton, G. tomentosum, and feral populations of G. hirsutum in the Florida Keys, and of G. hirsutum / G. barbadense on the U.S. Virgin Islands and Puerto Rico. For these reasons, restrictions on field plot experimental use permits and commercial planting of Bt-cotton has been instituted in these areas. Similarly, GM cotton is now planted only in regions of the world where there are no wild relatives, in order to avoid potential outcross with related weeds. Dispersal of pollen from transgenic cotton plants to surrounding non- transgenic plants has been reported. Umbeck et al. [J. Econ. Entomol. 84: 1943-1950] investigated pollen dispersal from transgenic cotton embedded in a field of conventional cotton in the United States and observed up to 5.7% out-crossing rates inspite of buffer rows. Transgene escape could be avoided via chloroplast genetic engineering because of maternal inheritance of transgenes in cotton. Another concern about GM crops expressing Bt toxins is that suboptimal production of toxins might result in an increased risk of pests developing Bt resistance. Nuclear engineered Bt cotton due to low expression of transgenes is not fully protected from the insect-pest attack and it needs several sprays of pesticides on crop fields to minimize the yield loss. d) Low-cost production of vaccines and biopharmaceuticals Another major problem is the high cost of biopharmaceuticals. Globally, about 170 million people are infected with hepatitis C virus, with 3-4 million new infections each year (WHO fact sheet 164, October 2000). WHO Department of Communicable Disease Surveillance and Response reports that more than one third of world population is infected with Hepatitis B. In Asia, the prevalence of chronic hepatitis B and C is very high (about 110 million infected by HCV and 150 million infected by HBV). A large majority of Hepatitis C infected patients have severe liver cirrhosis and currently there is no vaccine available for this disease. The annual requirement of Insulin like Growth Factor I, per cirrhotic patient is 600 mg (1.5-2 mg per day) and the cost of IGF-1 per mg is $30,000. Current annual cost of interferon therapy for viral hepatitis is $26,000 per year (Cowley & Geoffrey, Newsweek, April 22, 2002). Therefore, agricultural scale production of therapeutic proteins and vaccines (especially for agents of bioterrrorism) is necessary to meet such large demand at a reasonable cost. However, this should be achieved without contaminating our food supply and harming the environment or other life forms. Agricultural production of therapeutic proteins should dramatically lower cost for consumers. There is an urgent need for oral delivery of therapeutic proteins and vaccine antigens to dramatically reduce their production, purification, storage and transportation costs and minimize complications associated with intravenous delivery. Oral delivery of therapeutic proteins via plant cells (like carrots) should lower the production cost by 70-90% compared to intravenous delivery. 2. List the milestones (indicators of progress) from your Project Plan. 1. Engineer the chloroplast genome of economically important crops, including Cotton, Carrot 2. Express vaccine antigens and other human therapeutic proteins via the tobacco chloroplast genome for purification 3. Modify the tobacco chloroplast genome to introduce a glycosylation pathway 4. Express vaccine antigens and other human therapeutic proteins via the carrot chloroplast genome for oral delivery 5. Determine the DNA sequence of the chloroplast genome of economically important crops. 6. Develop new methods to improve transgene containment. 3a List the milestones that were scheduled to be addressed in FY 2005. For each milestone, indicate the status: fully met, substantially met, or not met. If not met, why. 1. Express vaccine antigens and other human thereapeutic proteins via the tobacco chloroplast genome for purification. Milestone Substantially Met 2. Determine the DNA sequence of the chloroplast genome of economically important crops. Milestone Substantially Met 3. Develop new methods to improve transgene containment. Milestone Substantially Met 3b List the milestones that you expect to address over the next 3 years (FY 2006, 2007, and 2008). What do you expect to accomplish, year by year, over the next 3 years under each milestone? Express vaccine antigens and other human therapeutic proteins via the tobacco chloroplast genome for purification and study their functionality using suitable in vitro systems and animal model systems (2006-2009). Express vaccine antigens and other human therapeutic proteins via the chloroplast genome of edible crops and study their oral delivery using animal models (2006-2009). Determine the DNA sequence of the chloroplast genome of economically important crops (FY 2006-2009). Understand the mechanism of oral delivery of foreign proteins (GFP) expressed in plants using animal models (2006-2009). Engineer chloroplast genome of economically important crops (2006-2009). 4a What was the single most significant accomplishment this past year? Naturally occurring cytoplasmic male sterility (CMS) have been known for over 100 years. CMS systems are used to produce commercial F1 hybrid lines. Dr. Daniell's group reported the first engineered cytoplasmic male sterility system in plants. They studied the effect of light regulation of the phaA gene coding for kethiolase engineered via the chloroplast genome. The phaA gene was efficiently transcribed and translated in all tissue types examined, including leaves, flowers and anthers. The transgenic lines were normal except for the male sterile phenotype, lacking pollen. Scanning electron microscopy revealed a collapsed morphology of the pollen grains. Transgenic lines showed an accelerated pattern of anther development, affecting their maturation and resulted in aberrant tissue patterns. Abnormal thickening of the outer wall, enlarged endothecium and vacuolation, decreased the inner space of the locules, affected pollen grain and resulted in the irregular shape or collapsed phenotype. Reversibility of the male sterile phenotype was observed under continuous illumination, resulting in viable pollen and copious amount of seeds. This study offers a new tool for transgene containment for both nuclear and organelle genomes and provides an expedient mechanism for F1 hybrid seed production. This study was featured on the cover of Plant Physiology in July 2005 and in Nature in August 2005. 4b List other significant accomplishments, if any. Lack of complete chloroplast genome sequences is still one of the major limitations to extending chloroplast genetic engineering technology to useful crops. Dr. Daniellss group sequenced the soybean chloroplast genome and compared it to the other completely sequenced legumes, Lotus and Medicago. The chloroplast genome of Glycine is 152,218 basepairs (bp) in length, including a pair of inverted repeats of 25,574 bp of identical sequence separated by a small single copy region of 17,895 bp and a large single copy region of 83,175 bp. The genome contains 111 unique genes, and 19 of these are duplicated in the inverted repeat (IR). Comparisons of the Glycine, Lotus and Medicago confirm organization of legume chloroplast genomes based on previous studies. Gene content of the three legumes is nearly identical. The rpl22 gene is missing from all three legumes, and Medicago is missing rps16 and one copy of the IR. Gene order in Glycine, Lotus, and Medicago differs from the usual gene order for angiosperm chloroplast genomes by the presence of a single, large inversion of 51 kilobases (kb). Detailed analyses of repeated sequences indicate that many of the Glycine repeats that are located in the intergenic spacer regions and introns occur in the same location in the other legumes and in Arabidopsis, suggesting that they may play some functional role. The presence of small repeats of psbA and rbcL in legumes that have lost one copy of the IR indicate that this loss has only occurred once during the evolutionary history of legumes The currently available human vaccine for anthrax is derived from the culture supernatant of Bacillus anthracis. In addition to the protective antigen (PA), the vaccine contains traces of the lethal and edema factors and these may contribute to adverse side effects associated with this vaccine. Therefore, an effective expression system that can provide a clean, safe and efficacious vaccine is required. Therefore, Dr. Daniells group expressed PA in transgenic tobacco chloroplasts by inserting the pagA gene into the chloroplast genome, in an effort to produce anthrax vaccine in large quantities and free of extraneous bacterial contaminants. Mature leaves grown under continuous illumination contained PA up to 14. 2% of the total soluble protein. PA was purified from leaf extracts and tested for its ability to induce protective immunity in mice. Cytotoxity measurements in macrophage lysis assays showed that chloroplast-derived PA was equal in potency to PA produced in B. anthracis. An average yield of about 150 mg of PA per plant should produce 360 million doses of a purified vaccine free of bacterial toxins EF and LF from one acre of land. This yield could be further increased 18-fold by using a commercial cultivar. Such high expression levels without using fermenters, the strong immune response, and the immunoprotection offered by the chloroplast-derived PA should facilitate development of a cleaner and safer anthrax vaccine at a lower production cost. This is the first report of immunogenic and immunoprotective properties of plant-derived anthrax vaccine antigen. Dr. Daniells group demonstrated the feasibility of multigene engineering via the chloroplast genome. Northern blot analyses performed on chloroplast transgenic lines harboring seven different heterologous operons revealed that polycistronic mRNA was the predominant transcript produced. Despite the lack of processing of such polycistrons, large amounts of foreign protein accumulation was observed in these transgenic lines, indicating abundant translation of polycistrons. These results show that the chloroplast posttranscriptional machinery can indeed detect and translate multigenic sequences that are not of chloroplast origin. In contrast to native transcripts, processed and unprocessed heterologous polycistrons were stable, even in the absence of 3 untranslated regions (UTRs). Addressing questions about polycistrons, and the sequences required for their processing and transcript stability are essential in chloroplast metabolic engineering. Knowledge of such factors would enable engineering of foreign pathways independent of the chloroplast complex post-transcriptional regulatory machinery. 4d Progress report. This report serves to document research conducted under an Specific Cooperative Agreement (58-3611-2-106) entitled Chloroplast genetic engineering between ARS and the University of Central Florida and Dr. Henry Daniell. Additional details of the research can be found in the report for the parent research project #3611-21000-017-00D, Chloroplast Genetic Engineering. The research is developing chloroplast genetic engineering technology, with its unique advantages, to create crops with new metabolic capabilities, such as the capability to produce pharmaceuticals and other high-value specialty materials. This years progress included engineering cytoplasmic male sterility via the chloroplast genome as a new means of transgene containment and obtaining the complete chloroplast genome sequence of soybean (Glycine max) to facilitate chloroplast genetic engineering of this species. 5. Describe the major accomplishments over the life of the project, including their predicted or actual impact. This project was initiated as a result of the FY 2002 (continued for 2003- 2005) Appropriations Bill passed by Congress and signed by the President for research on "means of genetically engineering chloroplasts(s) to increase efficiency of photosynthesis as a key component of agricultural production and to reduce the spread of transgenes via pollen flow." Production of Anthrax Vaccine (vaccine tested at NIH) CDC lists Bacillus anthracis as a category A agent and estimates the cost of an anthrax attack to exceed $26 billion per 100,000 exposed individuals. Concerns regarding vaccine purity, requirement for multiple injections, and a limited supply of the protective antigen (PA), underscore the urgent need for an improved vaccine. Therefore, the recombinant PA was produced in transgenic tobacco plants; this should eliminate any inadvertent contamination of food/feed supply. Chloroplast- derived PA bound to anthrax toxin receptor, heptamerized, and bound to lethal factor, resulting in macrophage lysis; up to 25 g functional PA/ml crude extract was observed. With an average yield of 172mg of PA per plant, 400 million doses of vaccine (free of contaminants) could be produced per acre of transgenic tobacco, using an experimental cultivar in a greenhouse, which could be further enhanced 18.17 fold using a commercial cultivar in the field. Engineering the carrot chloroplast genome to confers enhanced salt tolerance Salinity is one of the major factors that limits geographical distribution of plants and adversely affects crop productivity and quality. Salt stress is a major abiotic stress in plant agriculture. The problem of soil salinity has been compounded by irrigation and excessive use of fertilizers. About 20% of the worlds irrigated lands are affected by salinity. Currently, high salinity limits crop production in 30% of the irrigated land in the United States and 20 million hectares globally. Carrot is classified as a salt sensitive plant and there is 7% growth reduction for every 10 mM increment in salinity above 20 mM salt. Therefore carrot is an ideal candidate for genetic manipulation for increased salt tolerance. We achieved high-level expression of betaine aldehyde dehydrogenase in cultured cells, roots and leaves of carrot via plastid genetic engineering. BADH enzyme activity was enhanced 8-fold in transgenic carrot cell cultures, grew 7 fold more and accumulated 50-54 fold more betaine (93-101 mmol g-1 DW of alanine betaine and glycine betaine) than untransformed cells grown in liquid medium containing 100 mM NaCl. Transgenic carrot plants expressing BADH grew in the presence of high concentrations of NaCl (up to 400 mM), the highest level of salt tolerance reported so far among genetically modified crop plants. BADH expression was 74.8% in non-green edible parts (carrots) containing chromoplasts, 53% in proplastids of cultured cells when compared to chloroplasts (100%) in leaves. Demonstration of plastid transformation via somatic embryogenesis utilizing non-green tissues as recipient of foreign DNA for the first time overcomes two of the major obstacles in extending this technology to important crop plants. Stable transformation of the cotton plastid genome and maternal inheritance of transgenes Chloroplast genetic engineering overcomes concerns of gene containment, low levels of transgene expression, gene silencing, positional and pleiotropic effects or presence of vector sequences in transformed genomes. Several therapeutic proteins and agronomic traits have been highly expressed via the tobacco chloroplast genome but extending this concept to important crops has been a major challenge; lack of 100% homologous species-specific chloroplast transformation vectors containing suitable selectable markers, ability to regulate transgene expression in developing plastids and inadequate tissue culture systems via somatic embryogenesis are major challenges. We have employed a Double Barrel plastid transformation vector that harbors two selectable marker genes (aphA-6 and nptII) to detoxify the same antibiotic by two enzymes, irrespective of the type of tissues or plastids; by combining this with efficient regeneration system via somatic embryogenesis, cotton plastid transformation was achieved for the first time. Chloroplast transgenic lines were fertile, flowered and set seeds similar to untransformed plants. Transgenes stably integrated into the cotton chloroplast genome were maternally inherited and were not transmitted via pollen when out- crossed with untransformed female plants. Cotton is one of the most important genetically modified crops ($ 120 billion U.S. annual economy). Successful transformation of the chloroplast genome should address concerns about transgene escape, insects developing resistance, inadequate insect control and promote public acceptance of genetically modified cotton. Successful chloroplast expression of both genes encoding Rubisco We demonstrated that the gene encoding the small subunit of Rubisco, which is normally located in the nucleus, could be expressed from the chloroplast genome to achieve near normal rates of photosynthesis. Previous research indicated that expression/assembly of Rubisco using a small subunit gene located in the chloroplast was low. The research was conducted in the laboratory of Dr. Henry Daniell, University of Central Florida, using plants, materials and advice provided by Dr. Portis, in the Photosynthesis Research Unit, Urbana, IL. Rubisco levels and photosynthesis were restored by chloroplast transformation with a small subunit gene at a highly active region for transcription, using a previously transformed (nuclear) tobacco plant in which Rubisco expression is severely reduced by the incorporation of an antisense construct against the small subunit gene family in the tobacco nuclear genome. The research opens a potential avenue for using chloroplast engineering for the facile evaluation of foreign Rubisco genes in planta. 6. What science and/or technologies have been transferred and to whom? When is the science and/or technology likely to become available to the end- user (industry, farmer, other scientists)? What are the constraints, if known, to the adoption and durability of the technology products? Because of unique advantages of the chloroplast genetic engineering technology, a new biotech company has been formed for commercial development of chloroplast transformation technology. Despite recent failures of several plant made pharmaceutical companies and down turn in economy, this company has attracted multi-million dollar investment. The company is now conducting field trials of transgenic plants for large- scale production and purification of therapeutic proteins is in progress. Establishment of this company has already created high tech jobs in Florida, South Carolina and Missouri. In addition, this company is in the process of licensing dominant patents awarded to Daniell to several major biotechnology companies. Therefore several crop plants will be genetically modified using chloroplast technology, in an environmentally friendly manner to confer much needed agronomic traits or to clean up the environment (phytoremediation of toxic metals) or produce high value biomaterials (such as biodegradable polymers). Major constrains are the cost of clinical trials and public acceptance of genetically modified crops, especially in Europe. 7. List your most important publications in the popular press and presentations to organizations and articles written about your work. (NOTE: List your peer reviewed publications below). Ruiz, O. and Daniell, H. (2005) Engineering cytoplasmic male sterility via the chloroplast genome. Plant Physiology, 138: 1232-1246, featured on the cover. Quesada-Vargas, T., Ruiz, O.N., Daniell, H. (2005) Characterization of heterologous multigene operons in transgenic chloroplasts: transcription, processing and translation. Plant Physiology, 138: 1746-1762. H. Daniell, S. Kumar and N. Duformantel (2005) Breakthrough in chloroplast genetic engineering of agronomically important crops. Trends in Biotechnology, 23: 238-245. Alpeter, F., Baisakh, N., Beachy, R., Bock, R., Capell, T., Christou, P., Daniell, H. et al. (2005) Particle bombardment and genetic enhancement of crops: myths and realities. Molecular Breeding, 15: 305-327. Grevich, J. and Daniell, H. (2005) Chloroplast genetic engineering: Recent advances and perspectives. Critical Reviews in Plant Sciences, 24: 1-25. H. Daniell, S. Chebolu, S. Kumar, M. Singleton, R. Falconer (2005) Chloroplast- derived Vaccine antigens and other Therapeutic proteins. Vaccine, 23: 1779-1783.

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      Publications


        Progress 10/01/03 to 09/30/04

        Outputs
        4. What were the most significant accomplishments this past year? This report serves to document research conducted under an Specific Cooperative Agreement between ARS and the University of Central Florida. Additional details of the research can be found in the report for the parent research project #3611-21000-017-00D, Chloroplast Genetic Engineering. The research is developing chloroplast genetic engineering technology, with its unique advantages, to create crops with new metabolic capabilities, such as the capability to produce pharmaceuticals and other high-value specialty materials. This year's progress included conferring a high level of salt tolerance to carrot plants by chloroplast transformation to obtain high levels of an osmoprotectant and developing procedures that achieved transformation of the cotton chloroplast genome.

        Impacts
        (N/A)

        Publications